# Solr Queries
# Gene Phenotype Associations By Taxa
| species | count |
|---|---|
| Total | 831,521 (+12,831) |
| Homo sapiens | 270,594 (+18,405) |
| Mus musculus | 264,200 (0) |
| Caenorhabditis elegans | 77,879 (0) |
| Saccharomyces cerevisiae S288C | 68,350 (+75) |
| Drosophila melanogaster | 67,613 (+877) |
| Danio rerio | 63,486 (+193) |
| organism | 11,234 (-9,550) |
| Xenopus laevis | 1,848 (+1,848) |
| Rattus norvegicus | 1,092 (+296) |
| Xenopus tropicalis | 687 (+687) |
| Drosophila hydei | 463 (0) |
| Canis lupus familiaris | 457 (0) |
| Drosophila subobscura | 377 (0) |
| Drosophila virilis | 341 (0) |
| Drosophila ananassae | 270 (0) |
| Drosophila simulans | 208 (0) |
| Drosophila pseudoobscura pseudoobscura | 206 (0) |
| Drosophila willistoni | 193 (0) |
| Bos taurus | 160 (0) |
| Drosophila robusta | 153 (0) |
| Drosophila funebris | 133 (0) |
| Felis catus | 128 (0) |
| Drosophila busckii | 124 (0) |
| Drosophila americana texana | 118 (0) |
| Drosophila americana americana | 82 (0) |
| Drosophila kikkawai | 82 (0) |
| Drosophila immigrans | 72 (0) |
| Scaptomyza pallida | 69 (0) |
| Drosophila affinis | 63 (0) |
| Drosophila prosaltans | 56 (0) |
| Drosophila buzzatii | 55 (0) |
| Ovis aries | 55 (0) |
| Drosophila mauritiana | 52 (0) |
| Drosophila paulistorum | 49 (0) |
| Drosophila miranda | 43 (0) |
| Drosophila littoralis | 34 (0) |
| Drosophila bifasciata | 33 (0) |
| Equus caballus | 31 (0) |
| Sus scrofa | 30 (0) |
| Drosophila ambigua | 27 (0) |
| Drosophila transversa | 22 (0) |
| Gallus gallus | 19 (0) |
| Capra hircus | 17 (0) |
| Phoenicopterus ruber | 17 (0) |
| Drosophila biarmipes | 15 (0) |
| Drosophila persimilis | 14 (0) |
| Zaprionus indianus | 14 (0) |
| Drosophila obscura | 13 (0) |
| Drosophila phalerata | 13 (0) |
| Drosophila mojavensis | 12 (0) |
| Drosophila auraria | 11 (0) |
| Drosophila mercatorum mercatorum | 11 (0) |
| Drosophila tropicalis | 10 (0) |
| Mustela putorius furo | 10 (0) |
| Oryctolagus cuniculus | 10 (0) |
| Drosophila sechellia | 9 (0) |
| Drosophila aldrichi | 7 (0) |
| Drosophila bipectinata | 7 (0) |
| Drosophila repleta | 7 (0) |
| Drosophila mediopunctata | 6 (0) |
| Drosophila novamexicana | 6 (0) |
| Drosophila crucigera | 4 (0) |
| Drosophila gaucha | 4 (0) |
| Drosophila pallidosa | 4 (0) |
| Macaca mulatta | 4 (0) |
| Neovison vison | 4 (0) |
| Scaptodrosophila rufifrons | 4 (0) |
| Drosophila equinoxialis | 3 (0) |
| Drosophila malerkotliana | 3 (0) |
| Drosophila melanica | 3 (0) |
| Drosophila metzii | 3 (0) |
| Drosophila nigromaculata | 3 (0) |
| Drosophila prostipennis | 3 (0) |
| Drosophila pseudoobscura bogotana | 3 (0) |
| Drosophila takahashii | 3 (0) |
| Meleagris gallopavo | 3 (0) |
| Mesocricetus auratus | 3 (0) |
| Oryzias latipes | 3 (0) |
| Bubalus bubalis | 2 (0) |
| Chymomyza costata | 2 (0) |
| Drosophila acutilabella | 2 (0) |
| Drosophila albomicans | 2 (0) |
| Drosophila arizonae | 2 (0) |
| Drosophila cardini | 2 (0) |
| Drosophila elegans | 2 (0) |
| Drosophila erecta | 2 (0) |
| Drosophila eugracilis | 2 (0) |
| Drosophila gibberosa | 2 (0) |
| Drosophila madeirensis | 2 (0) |
| Drosophila malerkotliana malerkotliana | 2 (0) |
| Drosophila mimica | 2 (0) |
| Drosophila nasuta | 2 (0) |
| Drosophila nebulosa | 2 (0) |
| Drosophila similis similis | 2 (0) |
| Drosophila tripunctata | 2 (0) |
| Scaptodrosophila lebanonensis | 2 (0) |
| Vulpes vulpes | 2 (0) |
| Acinonyx jubatus | 1 (0) |
| Anser caerulescens caerulescens | 1 (0) |
| Aspidoscelis inornatus | 1 (0) |
| Bos grunniens | 1 (0) |
| Chaetodipus intermedius | 1 (0) |
| Coereba flaveola | 1 (0) |
| Coturnix japonica | 1 (0) |
| Drosophila ararama | 1 (0) |
| Drosophila falleni | 1 (0) |
| Drosophila guttifera | 1 (0) |
| Drosophila lutescens | 1 (0) |
| Drosophila mulleri | 1 (0) |
| Drosophila nigrospiracula | 1 (0) |
| Drosophila pachea | 1 (0) |
| Drosophila tristis | 1 (0) |
| Drosophila yakuba | 1 (0) |
| Holbrookia maculata | 1 (0) |
| Mammuthus primigenius | 1 (0) |
| Micropterus salmoides | 1 (0) |
| NCBITaxon:61402 | 1 (0) |
| Numida meleagris | 1 (0) |
| Panthera onca | 1 (0) |
| Panthera tigris tigris | 1 (0) |
| Peromyscus polionotus | 1 (0) |
| Sciurus carolinensis | 1 (0) |
| Ursus americanus | 1 (0) |
| Vulpes lagopus | 1 (0) |
| Zaprionus sepsoides | 1 (0) |
| Zaprionus tuberculatus | 1 (0) |
| Other | 0 (0) |
# Gene Phenotype Associations By Source
| source | count |
|---|---|
| Total | 831,521 (+12,831) |
| mgislim | 256,624 (0) |
| hpoa | 184,954 (+11,521) |
| orphanet | 150,097 (+10,115) |
| omim | 108,251 (+4,791) |
| gwascatalog | 86,915 (-2,768) |
| wormbase | 77,879 (0) |
| flybase | 75,918 (+887) |
| zfinslim | 69,732 (+410) |
| sgd | 68,350 (+75) |
| clinvar | 33,686 (+1,411) |
| impc | 22,507 (0) |
| mgi | 21,753 (0) |
| mmrrc | 9,054 (+137) |
| coriell | 8,749 (+411) |
| xenbase | 2,535 (+2,535) |
| rgd | 1,087 (+296) |
| omia | 978 (0) |
| monarch | 957 (0) |
| Other | 0 (0) |
# Gene Variant Associations By Taxa
| species | count |
|---|---|
| Total | 1,006,185 (-2,771) |
| Mus musculus | 462,225 (+34) |
| Homo sapiens | 226,703 (+6,540) |
| Drosophila melanogaster | 194,638 (+1,767) |
| Caenorhabditis elegans | 62,043 (0) |
| Danio rerio | 23,169 (+2) |
| Bos taurus | 19,156 (0) |
| organism | 7,658 (-11,117) |
| Sus scrofa | 3,343 (0) |
| Gallus gallus | 1,645 (-2) |
| Drosophila ananassae | 601 (0) |
| Drosophila virilis | 575 (0) |
| Drosophila subobscura | 536 (0) |
| Drosophila hydei | 523 (0) |
| Drosophila simulans | 441 (+2) |
| Drosophila pseudoobscura pseudoobscura | 337 (+1) |
| Equus caballus | 235 (0) |
| Drosophila willistoni | 206 (0) |
| Drosophila funebris | 177 (0) |
| Drosophila americana texana | 149 (0) |
| Drosophila kikkawai | 123 (0) |
| Drosophila mauritiana | 122 (0) |
| Drosophila robusta | 122 (0) |
| Drosophila buzzatii | 121 (0) |
| Drosophila americana americana | 95 (0) |
| Drosophila immigrans | 91 (0) |
| Drosophila busckii | 88 (0) |
| Drosophila miranda | 88 (0) |
| Drosophila affinis | 58 (0) |
| Scaptomyza pallida | 53 (0) |
| Zaprionus indianus | 52 (0) |
| Drosophila mulleri | 50 (0) |
| Drosophila mojavensis | 45 (0) |
| Drosophila affinidisjuncta | 42 (0) |
| Drosophila teissieri | 41 (0) |
| Drosophila persimilis | 39 (0) |
| Drosophila prosaltans | 39 (0) |
| Drosophila littoralis | 35 (0) |
| Drosophila paulistorum | 32 (0) |
| Drosophila takahashii | 30 (0) |
| Drosophila lutescens | 27 (0) |
| Drosophila arizonae | 26 (0) |
| Drosophila bifasciata | 26 (0) |
| Drosophila sechellia | 25 (0) |
| Drosophila jambulina | 24 (0) |
| Drosophila punjabiensis | 24 (0) |
| Drosophila ambigua | 19 (0) |
| Drosophila bipectinata | 18 (0) |
| Drosophila phalerata | 18 (0) |
| Drosophila transversa | 17 (0) |
| Drosophila auraria | 14 (0) |
| Drosophila biarmipes | 14 (0) |
| Drosophila obscura | 14 (0) |
| Drosophila hawaiiensis | 12 (0) |
| Drosophila mercatorum mercatorum | 12 (0) |
| Drosophila yakuba | 10 (+1) |
| Drosophila malerkotliana | 9 (0) |
| Drosophila malerkotliana malerkotliana | 8 (0) |
| Drosophila mediopunctata | 8 (0) |
| Drosophila novamexicana | 8 (0) |
| Ovis aries | 7 (0) |
| Scaptodrosophila lebanonensis | 7 (0) |
| Drosophila albomicans | 6 (0) |
| Drosophila grimshawi | 6 (0) |
| Drosophila prostipennis | 6 (0) |
| Drosophila repleta | 6 (0) |
| Drosophila tropicalis | 6 (0) |
| NCBITaxon:28584 | 6 (0) |
| Chymomyza costata | 5 (0) |
| Drosophila pachea | 5 (0) |
| Hirtodrosophila confusa | 5 (0) |
| Drosophila aldrichi | 4 (0) |
| Drosophila elegans | 4 (0) |
| Drosophila eugracilis | 4 (0) |
| Drosophila azteca | 3 (0) |
| Drosophila metzii | 3 (0) |
| Drosophila pallidosa | 3 (0) |
| Drosophila crucigera | 2 (0) |
| Drosophila equinoxialis | 2 (0) |
| Drosophila erecta | 2 (0) |
| Drosophila falleni | 2 (0) |
| Drosophila gaucha | 2 (0) |
| Drosophila madeirensis | 2 (0) |
| Drosophila nasuta | 2 (0) |
| Drosophila nigrospiracula | 2 (0) |
| Drosophila pseudoobscura bogotana | 2 (0) |
| Scaptodrosophila rufifrons | 2 (0) |
| Zaprionus sepsoides | 2 (0) |
| Zaprionus tuberculatus | 2 (0) |
| Drosophila acutilabella | 1 (0) |
| Drosophila ararama | 1 (0) |
| Drosophila athabasca | 1 (0) |
| Drosophila borealis | 1 (0) |
| Drosophila cardini | 1 (0) |
| Drosophila gibberosa | 1 (0) |
| Drosophila guttifera | 1 (0) |
| Drosophila melanica | 1 (0) |
| Drosophila mimica | 1 (0) |
| Drosophila nebulosa | 1 (0) |
| Drosophila nigromaculata | 1 (0) |
| Drosophila orena | 1 (0) |
| Drosophila similis similis | 1 (0) |
| Drosophila tripunctata | 1 (0) |
| Drosophila tristis | 1 (0) |
| Xenopus laevis | 1 (+1) |
| Other | 0 (0) |
# Gene Variant Associations By Source
| source | count |
|---|---|
| Total | 1,006,185 (-2,771) |
| mgi | 460,559 (+1) |
| flybase | 205,892 (+1,805) |
| gwascatalog | 103,015 (-4,578) |
| clinvar | 94,327 (0) |
| wormbase | 62,039 (0) |
| omim | 29,857 (0) |
| animalqtldb | 25,715 (0) |
| zfin | 23,556 (0) |
| mmrrc | 14,490 (+279) |
| impc | 6,002 (0) |
| Other | 0 (0) |
# Gene Disease Causal Associations By Taxa
| species | count |
|---|---|
| Total | 9,289 (+92) |
| Homo sapiens | 9,283 (+92) |
| Mus musculus | 6 (0) |
| Other | 0 (0) |
# Gene Disease Causal Associations By Source
| species | count |
|---|---|
| Total | 9,289 (+92) |
| omim | 6,387 (+55) |
| orphanet | 6,233 (+66) |
| clinvar | 1,007 (0) |
| gwascatalog | 14 (+1) |
| mgi | 6 (0) |
| mgislim | 6 (0) |
| mmrrc | 2 (0) |
| Other | 0 (0) |
# Gene Disease Non-causal Associations By Taxa
| species | count |
|---|---|
| Total | 25,735 (-4,485) |
| Homo sapiens | 24,950 (-1,725) |
| Canis lupus familiaris | 230 (0) |
| Bos taurus | 120 (0) |
| Felis catus | 62 (0) |
| organism | 62 (-2,760) |
| Ovis aries | 47 (0) |
| Gallus gallus | 41 (0) |
| Equus caballus | 39 (0) |
| Sus scrofa | 38 (0) |
| Capra hircus | 15 (0) |
| Oryctolagus cuniculus | 12 (0) |
| Coturnix japonica | 9 (0) |
| Equus asinus | 5 (0) |
| Neovison vison | 5 (0) |
| Bubalus bubalis | 4 (0) |
| Mesocricetus auratus | 4 (0) |
| Bos grunniens | 3 (0) |
| Calidris pugnax | 3 (0) |
| Macaca mulatta | 3 (0) |
| Oryzias latipes | 3 (0) |
| Vulpes lagopus | 3 (0) |
| Acinonyx jubatus | 2 (0) |
| Geospiza fortis | 2 (0) |
| Macaca fascicularis | 2 (0) |
| Mammuthus primigenius | 2 (0) |
| Meleagris gallopavo | 2 (0) |
| Mustela putorius furo | 2 (0) |
| Vulpes vulpes | 2 (0) |
| Aepyceros melampus | 1 (0) |
| Anas platyrhynchos | 1 (0) |
| Anser caerulescens caerulescens | 1 (0) |
| Aspidoscelis inornatus | 1 (0) |
| Astyanax | 1 (0) |
| Balaenoptera acutorostrata | 1 (0) |
| Balaenoptera omurai | 1 (0) |
| Bos mutus | 1 (0) |
| Camelus dromedarius | 1 (0) |
| Canis latrans | 1 (0) |
| Canis lupus | 1 (0) |
| Catopuma temminckii | 1 (0) |
| Cavia porcellus | 1 (0) |
| Chaetodipus intermedius | 1 (0) |
| Coereba flaveola | 1 (0) |
| Columba livia | 1 (0) |
| Coturnix coturnix | 1 (0) |
| Ctenopharyngodon idella | 1 (0) |
| Delphinapterus leucas | 1 (0) |
| Delphinus capensis | 1 (0) |
| Dromaius novaehollandiae | 1 (0) |
| Elephas maximus | 1 (0) |
| Falco cherrug | 1 (0) |
| Falco rusticolus | 1 (0) |
| Gorilla gorilla | 1 (0) |
| Holbrookia maculata | 1 (0) |
| Hylobates agilis | 1 (0) |
| Hylobates lar | 1 (0) |
| Lacerta | 1 (0) |
| Leopardus colocolo | 1 (0) |
| Leopardus geoffroyi | 1 (0) |
| Leopardus guigna | 1 (0) |
| Lipotes vexillifer | 1 (0) |
| Macaca fuscata | 1 (0) |
| Megaptera novaeangliae | 1 (0) |
| Monarcha castaneiventris | 1 (0) |
| NCBITaxon:61402 | 1 (0) |
| NCBITaxon:9870 | 1 (0) |
| Neophocaena phocaenoides | 1 (0) |
| Numida meleagris | 1 (0) |
| Oreochromis niloticus | 1 (0) |
| Pan troglodytes | 1 (0) |
| Panthera onca | 1 (0) |
| Panthera pardus | 1 (0) |
| Panthera tigris | 1 (0) |
| Panthera tigris tigris | 1 (0) |
| Peromyscus maniculatus | 1 (0) |
| Peromyscus polionotus | 1 (0) |
| Phoenicopterus ruber | 1 (0) |
| Prionailurus bengalensis | 1 (0) |
| Rattus norvegicus | 1 (0) |
| Sapajus apella | 1 (0) |
| Sciurus carolinensis | 1 (0) |
| Spinus cucullatus | 1 (0) |
| Stercorarius parasiticus | 1 (0) |
| Streptopelia risoria | 1 (0) |
| Sula leucogaster | 1 (0) |
| Sula sula | 1 (0) |
| Sus scrofa domesticus | 1 (0) |
| Symphalangus syndactylus | 1 (0) |
| Takifugu rubripes | 1 (0) |
| Tursiops truncatus | 1 (0) |
| Ursus americanus | 1 (0) |
| Other | 0 (0) |
# Gene Disease Non-Causal Associations By Source
| species | count |
|---|---|
| Total | 25,735 (-4,485) |
| gwascatalog | 20,508 (-4,476) |
| omim | 3,603 (-69) |
| orphanet | 1,318 (+42) |
| omia | 725 (0) |
| clinvar | 176 (+1) |
| Other | 0 (0) |
| coriell | 0 (-44) |
| udp | 0 (-2) |
# Gene Homology By Subject Taxa
| source | count |
|---|---|
| Total | 6,906,371 (+35,134) |
| Danio rerio | 567,002 (-31,328) |
| Mus musculus | 492,195 (+7,488) |
| Rattus norvegicus | 490,215 (+3,729) |
| Equus caballus | 445,812 (-3,968) |
| Xenopus tropicalis | 443,533 (+184,575) |
| Homo sapiens | 404,172 (+1,991) |
| Canis lupus familiaris | 398,179 (+49,783) |
| Sus scrofa | 378,279 (-91,236) |
| Monodelphis domestica | 367,036 (-73,315) |
| Caenorhabditis elegans | 354,852 (+27,578) |
| Bos taurus | 346,867 (+2,119) |
| Drosophila melanogaster | 344,587 (-12,863) |
| Gallus gallus | 341,819 (-4,269) |
| Pan troglodytes | 274,748 (+8,282) |
| Anolis carolinensis | 265,401 (+2,947) |
| Macaca mulatta | 253,700 (-62,525) |
| Ornithorhynchus anatinus | 252,084 (+9,901) |
| Felis catus | 243,184 (+5,080) |
| Dictyostelium discoideum | 86,068 (+1,162) |
| Saccharomyces cerevisiae S288C | 73,545 (+5,110) |
| Schizosaccharomyces pombe 972h- | 49,505 (+2,785) |
| Schizosaccharomyces pombe | 17,170 (+1,105) |
| Escherichia coli | 8,926 (+222) |
| Arabidopsis thaliana | 7,167 (+787) |
| organism | 325 (-6) |
| Other | 0 (0) |
# Gene Interactions By Source
| source | count |
|---|---|
| Total | 4,783,219 (+509,951) |
| string | 3,500,868 (+386,750) |
| biogrid | 1,468,183 (+128,077) |
| Other | 0 (0) |
# Gene Interactions By Subject Taxa
| source | count |
|---|---|
| Total | 4,783,219 (+509,951) |
| Homo sapiens | 1,839,617 (+115,703) |
| Mus musculus | 788,826 (+7,764) |
| organism | 554,998 (+81) |
| Drosophila melanogaster | 479,016 (0) |
| Xenopus tropicalis | 386,491 (+386,491) |
| Caenorhabditis elegans | 384,828 (-12) |
| Danio rerio | 293,106 (+4) |
| Rattus norvegicus | 56,335 (-79) |
| Other | 2 (-1) |
# Gene Function By Taxa
| source | count |
|---|---|
| Total | 3,035,025 (+38,731) |
| Mus musculus | 359,626 (+871) |
| Homo sapiens | 327,773 (+928) |
| Rattus norvegicus | 296,896 (-762) |
| organism | 231,645 (+17,827) |
| Danio rerio | 205,879 (+1,170) |
| Gallus gallus | 162,985 (+2,615) |
| Sus scrofa | 144,516 (+812) |
| Canis lupus familiaris | 138,842 (+1,532) |
| Bos taurus | 136,689 (+409) |
| Caenorhabditis elegans | 107,177 (+16) |
| Drosophila melanogaster | 103,632 (+226) |
| Saccharomyces cerevisiae S288C | 69,258 (-466) |
| Aspergillus niger CBS 513.88 | 64,542 (-151) |
| Dictyostelium discoideum | 62,203 (-386) |
| Aspergillus oryzae RIB40 | 58,194 (-150) |
| Aspergillus nidulans FGSC A4 | 54,177 (-165) |
| Aspergillus fumigatus | 50,470 (-153) |
| NCBITaxon:46472 | 29,457 (-15) |
| NCBITaxon:75750 | 28,976 (-15) |
| Aspergillus brasiliensis CBS 101740 | 26,707 (-16) |
| Aspergillus flavus NRRL3357 | 26,707 (-14) |
| NCBITaxon:1137211 | 26,312 (-16) |
| NCBITaxon:767770 | 25,799 (-17) |
| NCBITaxon:1073089 | 25,635 (-15) |
| NCBITaxon:41063 | 25,588 (-15) |
| Aspergillus luchuensis IFO 4308 | 25,512 (-18) |
| NCBITaxon:602072 | 25,486 (-16) |
| NCBITaxon:690307 | 24,270 (-18) |
| Aspergillus fischeri NRRL 181 | 23,848 (-17) |
| Aspergillus terreus NIH2624 | 23,710 (-15) |
| Aspergillus fumigatus A1163 | 22,095 (-13) |
| NCBITaxon:1160497 | 21,980 (-14) |
| Schizosaccharomyces pombe 972h- | 21,664 (-226) |
| Aspergillus clavatus NRRL 1 | 21,357 (-18) |
| Schizosaccharomyces pombe | 18,650 (+39) |
| Xenopus tropicalis | 16,768 (+14,997) |
| Other | 0 (0) |
# Gene Anatomy By Taxa
| source | count |
|---|---|
| Total | 2,787,157 (+187,097) |
| Homo sapiens | 692,349 (+6,807) |
| organism | 679,479 (+38,312) |
| Mus musculus | 620,089 (+4) |
| Danio rerio | 363,718 (0) |
| Drosophila melanogaster | 196,819 (-8,161) |
| Xenopus tropicalis | 150,129 (+150,129) |
| Caenorhabditis elegans | 71,618 (0) |
| Rattus norvegicus | 12,956 (+6) |
| Other | 0 (0) |
# Genotype Phenotype Associations By Taxa
| species | count |
|---|---|
| Total | 494,431 (+544) |
| Mus musculus | 370,895 (0) |
| Danio rerio | 121,426 (+544) |
| organism | 1,070 (0) |
| Mus genus | 987 (0) |
| Mus musculus castaneus | 14 (0) |
| Mus musculus musculus x M. m. domesticus | 12 (0) |
| Mus musculus molossinus | 11 (0) |
| Mus setulosus | 8 (0) |
| Homo sapiens | 3 (0) |
| Mus musculus musculus | 3 (0) |
| Mus musculus bactrianus | 1 (0) |
| Mus spretus | 1 (0) |
| Other | 0 (0) |
# Genotype Phenotype Associations By Source
| source | count |
|---|---|
| Total | 494,431 (+544) |
| mgi | 347,193 (0) |
| zfin | 121,426 (+544) |
| impc | 25,809 (0) |
| coriell | 3 (0) |
| Other | 0 (0) |
# Model Disease Associations By Taxa
| species | count |
|---|---|
| Total | 36,823 (+148) |
| Homo sapiens | 12,271 (-5) |
| Caenorhabditis elegans | 11,880 (+1) |
| Mus musculus | 8,355 (-17) |
| Drosophila melanogaster | 2,090 (+169) |
| Danio rerio | 1,250 (0) |
| Canis lupus familiaris | 684 (+684) |
| Bos taurus | 115 (+112) |
| Felis catus | 55 (+55) |
| Equus caballus | 33 (+33) |
| Caprinae | 27 (0) |
| Mus genus | 18 (0) |
| organism | 18 (0) |
| Sus scrofa | 10 (+10) |
| Capra hircus | 5 (0) |
| Gallus gallus | 3 (0) |
| Bos | 2 (+2) |
| Mus musculus musculus x M. m. domesticus | 2 (0) |
| Other | 2 (0) |
| Bovinae | 1 (+1) |
| Equus genus | 1 (+1) |
| Mus musculus castaneus | 1 (0) |
| Canis | 0 (-684) |
| Bovidae | 0 (-115) |
| Felidae | 0 (-55) |
| Equidae | 0 (-34) |
| Sus | 0 (-10) |
# Model Disease Associations By Source
| source | count |
|---|---|
| Total | 36,823 (+148) |
| coriell | 12,274 (-5) |
| wormbase | 11,880 (+1) |
| mgi | 8,394 (-17) |
| flybase | 2,090 (+169) |
| zfin | 1,252 (0) |
| omia | 933 (0) |
| Other | 0 (0) |
# Disease Phenotype Associations By Taxa
| species | count |
|---|---|
| Total | 194,339 (+7,603) |
| Other | 194,339 (+7,603) |
# Disease Phenotype Associations By Source
| species | count |
|---|---|
| Total | 194,339 (+7,603) |
| hpoa | 192,300 (+7,603) |
| monarch | 1,765 (0) |
| omia | 221 (0) |
| Other | 0 (0) |
# Variant Genotype Associations By Taxa
| species | count |
|---|---|
| Total | 642,288 (+630) |
| Mus musculus | 548,571 (+599) |
| Danio rerio | 87,434 (0) |
| Homo sapiens | 4,928 (+30) |
| organism | 988 (+1) |
| Mus genus | 324 (0) |
| Mus setulosus | 13 (0) |
| Mus musculus molossinus | 9 (0) |
| Mus musculus bactrianus | 4 (0) |
| Rattus norvegicus | 4 (0) |
| Mus musculus musculus | 3 (0) |
| Mus spretus | 3 (0) |
| Mus musculus castaneus | 2 (0) |
| Bos taurus | 1 (0) |
| Cricetulus griseus | 1 (0) |
| Macaca mulatta | 1 (0) |
| Plecturocebus moloch | 1 (0) |
| Saguinus labiatus | 1 (0) |
| Other | 0 (0) |
# Variant Genotype Associations By Source
| source | count |
|---|---|
| Total | 642,288 (+630) |
| mmrrc | 374,465 (+599) |
| mgi | 179,029 (+243) |
| zfin | 87,434 (0) |
| impc | 39,634 (+71) |
| coriell | 4,966 (+31) |
| udp | 112 (0) |
| Other | 0 (0) |
# Variant Phenotype Associations By Taxa
| species | count |
|---|---|
| Total | 1,099,403 (+30,814) |
| Mus musculus | 426,340 (0) |
| Homo sapiens | 190,744 (+28,691) |
| Drosophila melanogaster | 145,075 (+1,881) |
| Bos taurus | 135,131 (0) |
| Caenorhabditis elegans | 107,255 (0) |
| Danio rerio | 60,434 (+242) |
| Sus scrofa | 17,386 (0) |
| Gallus gallus | 8,569 (0) |
| Ovis aries | 1,867 (0) |
| Equus caballus | 1,326 (0) |
| Drosophila hydei | 657 (0) |
| Drosophila subobscura | 602 (0) |
| Drosophila virilis | 599 (0) |
| Drosophila ananassae | 422 (0) |
| Drosophila pseudoobscura pseudoobscura | 324 (0) |
| Drosophila simulans | 283 (0) |
| Drosophila willistoni | 258 (0) |
| Drosophila funebris | 229 (0) |
| Drosophila americana texana | 206 (0) |
| Drosophila robusta | 156 (0) |
| Drosophila busckii | 142 (0) |
| organism | 110 (0) |
| Drosophila immigrans | 108 (0) |
| Drosophila americana americana | 100 (0) |
| Drosophila kikkawai | 95 (0) |
| Drosophila affinis | 76 (0) |
| Drosophila mauritiana | 76 (0) |
| Scaptomyza pallida | 71 (0) |
| Drosophila prosaltans | 68 (0) |
| Drosophila buzzatii | 67 (0) |
| Drosophila miranda | 65 (0) |
| Drosophila paulistorum | 60 (0) |
| Zaprionus indianus | 52 (0) |
| Drosophila littoralis | 45 (0) |
| Drosophila persimilis | 39 (0) |
| Drosophila bifasciata | 35 (0) |
| Drosophila mojavensis | 34 (0) |
| Drosophila ambigua | 28 (0) |
| Drosophila transversa | 22 (0) |
| Drosophila auraria | 18 (0) |
| Drosophila biarmipes | 18 (0) |
| Drosophila obscura | 14 (0) |
| Drosophila phalerata | 13 (0) |
| Drosophila bipectinata | 11 (0) |
| Drosophila mercatorum mercatorum | 11 (0) |
| Drosophila tropicalis | 10 (0) |
| Drosophila malerkotliana | 9 (0) |
| Drosophila mediopunctata | 9 (0) |
| Drosophila sechellia | 9 (0) |
| Drosophila takahashii | 8 (0) |
| Drosophila aldrichi | 7 (0) |
| Drosophila novamexicana | 7 (0) |
| Drosophila repleta | 7 (0) |
| Drosophila prostipennis | 6 (0) |
| Drosophila albomicans | 5 (0) |
| Drosophila crucigera | 4 (0) |
| Drosophila elegans | 4 (0) |
| Drosophila eugracilis | 4 (0) |
| Drosophila gaucha | 4 (0) |
| Drosophila pallidosa | 4 (0) |
| Scaptodrosophila rufifrons | 4 (0) |
| Drosophila equinoxialis | 3 (0) |
| Drosophila melanica | 3 (0) |
| Drosophila metzii | 3 (0) |
| Drosophila nigromaculata | 3 (0) |
| Drosophila pachea | 3 (0) |
| Drosophila pseudoobscura bogotana | 3 (0) |
| Chymomyza costata | 2 (0) |
| Drosophila acutilabella | 2 (0) |
| Drosophila arizonae | 2 (0) |
| Drosophila cardini | 2 (0) |
| Drosophila erecta | 2 (0) |
| Drosophila falleni | 2 (0) |
| Drosophila gibberosa | 2 (0) |
| Drosophila madeirensis | 2 (0) |
| Drosophila malerkotliana malerkotliana | 2 (0) |
| Drosophila mimica | 2 (0) |
| Drosophila nasuta | 2 (0) |
| Drosophila nebulosa | 2 (0) |
| Drosophila nigrospiracula | 2 (0) |
| Drosophila similis similis | 2 (0) |
| Drosophila tripunctata | 2 (0) |
| Drosophila yakuba | 2 (0) |
| Scaptodrosophila lebanonensis | 2 (0) |
| Zaprionus sepsoides | 2 (0) |
| Zaprionus tuberculatus | 2 (0) |
| Drosophila ararama | 1 (0) |
| Drosophila guttifera | 1 (0) |
| Drosophila lutescens | 1 (0) |
| Drosophila mulleri | 1 (0) |
| Drosophila tristis | 1 (0) |
| Other | 0 (0) |
# Variant Phenotype Associations By Source
| source | count |
|---|---|
| Total | 1,099,403 (+30,814) |
| mgi | 415,034 (0) |
| gwascatalog | 187,125 (+28,691) |
| animalqtldb | 164,279 (0) |
| flybase | 150,241 (+1,881) |
| wormbase | 107,363 (0) |
| zfin | 60,436 (+242) |
| impc | 30,000 (0) |
| udp | 3,395 (0) |
| clinvar | 221 (0) |
| coriell | 3 (0) |
| Other | 0 (0) |
# Variant Disease Associations By Taxa
| species | count |
|---|---|
| Total | 195,815 (-654) |
| Homo sapiens | 192,304 (-822) |
| Drosophila melanogaster | 2,090 (+169) |
| Mus musculus | 1,421 (-1) |
| Other | 0 (0) |
# Variant Disease Associations By Source
| source | count |
|---|---|
| Total | 195,815 (-654) |
| clinvar | 149,567 (+36) |
| gwascatalog | 42,193 (-855) |
| flybase | 2,090 (+169) |
| mgi | 1,421 (-1) |
| coriell | 470 (-3) |
| udp | 60 (0) |
| omim | 14 (0) |
| Other | 0 (0) |
# Publication Variant By Source
| source | count |
|---|---|
| Total | 6,378,076 (+600,377) |
| ncbigene | 5,074,239 (+393,530) |
| animalqtldb | 321,765 (0) |
| clinvar | 207,439 (0) |
| gwascatalog | 204,679 (+27,393) |
| xenbase | 182,971 (+182,971) |
| flybase | 139,329 (+1,656) |
| mgi | 88,405 (0) |
| wormbase | 55,544 (0) |
| zfin | 47,908 (0) |
| omim | 45,933 (0) |
| hgnc | 32,414 (+122) |
| coriell | 30,069 (+603) |
| go | 18,600 (0) |
| kegg | 6,627 (+152) |
| omia | 5,191 (0) |
| mmrrc | 3,911 (+31) |
| biogrid | 181 (+10) |
| Other | 0 (0) |
# Publication Gene By Source
| source | count |
|---|---|
| Total | 6,404,393 (+551,344) |
| ncbigene | 4,965,907 (+393,740) |
| go | 1,314,001 (+11) |
| biogrid | 492,019 (+31,009) |
| xenbase | 183,044 (+183,044) |
| gwascatalog | 103,689 (-2,819) |
| flybase | 90,390 (+968) |
| sgd | 86,882 (+91) |
| zfin | 74,391 (0) |
| mgi | 71,333 (+19) |
| clinvar | 58,204 (0) |
| mgislim | 40,035 (0) |
| wormbase | 37,982 (0) |
| hgnc | 31,257 (+123) |
| omim | 30,500 (+119) |
| zfinslim | 14,418 (0) |
| mmrrc | 11,070 (+123) |
| impc | 7,662 (+2) |
| animalqtldb | 5,178 (+1) |
| rgd | 303 (+52) |
| hpoa | 1 (0) |
| Other | 0 (0) |
# Publication Phenotype By Source
| source | count |
|---|---|
| Total | 6,404,393 (+551,344) |
| ncbigene | 4,965,907 (+393,740) |
| go | 1,314,001 (+11) |
| biogrid | 492,019 (+31,009) |
| xenbase | 183,044 (+183,044) |
| gwascatalog | 103,689 (-2,819) |
| flybase | 90,390 (+968) |
| sgd | 86,882 (+91) |
| zfin | 74,391 (0) |
| mgi | 71,333 (+19) |
| clinvar | 58,204 (0) |
| mgislim | 40,035 (0) |
| wormbase | 37,982 (0) |
| hgnc | 31,257 (+123) |
| omim | 30,500 (+119) |
| zfinslim | 14,418 (0) |
| mmrrc | 11,070 (+123) |
| impc | 7,662 (+2) |
| animalqtldb | 5,178 (+1) |
| rgd | 303 (+52) |
| hpoa | 1 (0) |
| Other | 0 (0) |
# Publication Genotype By Source
| source | count |
|---|---|
| Total | 122,984 (+206) |
| mgi | 77,882 (0) |
| zfin | 32,413 (0) |
| coriell | 8,437 (+206) |
| go | 4,252 (0) |
| Other | 0 (0) |
# Publication Disease By Source
| source | count |
|---|---|
| Total | 561,545 (+154,746) |
| wormbase | 223,803 (+153,324) |
| ncbigene | 197,689 (+153,333) |
| zfin | 119,657 (0) |
| ctd | 93,248 (+674) |
| clinvar | 82,670 (-114) |
| go | 46,749 (-20) |
| biogrid | 15,208 (+10) |
| mgi | 14,314 (-18) |
| omia | 13,936 (0) |
| flybase | 6,286 (+641) |
| coriell | 4,238 (+80) |
| hpoa | 3,243 (+662) |
| gwascatalog | 2,679 (-103) |
| mmrrc | 266 (+4) |
| monarch | 184 (0) |
| mgislim | 6 (0) |
| Other | 0 (0) |
# Publication Model By Source
| source | count |
|---|---|
| Total | 104,352 (+37,087) |
| wormbase | 68,078 (+36,264) |
| ncbigene | 54,143 (+36,240) |
| go | 22,199 (0) |
| mgi | 14,615 (+4) |
| coriell | 9,311 (+180) |
| biogrid | 6,214 (0) |
| flybase | 6,117 (+639) |
| zfin | 3,596 (0) |
| omia | 2,635 (0) |
| mmrrc | 206 (+4) |
| Other | 0 (0) |
# Case Model By Source
| source | count |
|---|---|
| coriell | 30,365 (+91) |
| Total | 30,365 (+91) |
| Other | 0 (0) |
# Case Disease By Source
| source | count |
|---|---|
| Total | 0 (0) |
| Other | 0 (0) |
# Case Variant By Source
| source | count |
|---|---|
| udp | 112 (0) |
| Total | 112 (0) |
| Other | 0 (0) |
# Case Genotype By Source
| source | count |
|---|---|
| coriell | 2,972 (+6) |
| Total | 2,972 (+6) |
| Other | 0 (0) |
# Case Gene By Source
| source | count |
|---|---|
| omim | 2 (0) |
| udp | 2 (0) |
| Total | 2 (0) |
| Other | 0 (0) |
# Case Phenotype By Source
| source | count |
|---|---|
| udp | 1,069 (0) |
| Total | 1,069 (0) |
| Other | 0 (0) |
# Gene Pathway By Source
| source | count |
|---|---|
| reactome | 460,330 (+46,212) |
| Total | 460,330 (+46,212) |
| ensembl | 107,960 (+12,185) |
| Other | 0 (0) |
# Gene Pathway By Taxa
| source | count |
|---|---|
| Total | 460,330 (+46,212) |
| organism | 231,645 (+17,827) |
| Homo sapiens | 43,975 (+1,888) |
| Mus musculus | 31,800 (+1,558) |
| Danio rerio | 28,664 (+1,717) |
| Canis lupus familiaris | 25,198 (+1,942) |
| Sus scrofa | 23,959 (+1,239) |
| Gallus gallus | 18,897 (+3,198) |
| Xenopus tropicalis | 16,768 (+14,997) |
| Drosophila melanogaster | 13,336 (+524) |
| Caenorhabditis elegans | 12,911 (+241) |
| Bos taurus | 10,921 (+907) |
| Rattus norvegicus | 2,256 (+174) |
| Other | 0 (0) |
# Pathway Phenotype By Source
| source | count |
|---|---|
| reactome | 696,798 (+33,718) |
| Total | 696,798 (+33,718) |
| ensembl | 663,115 (+32,524) |
| mgi | 516,395 (+24,971) |
| mgislim | 439,231 (+17,021) |
| zfin | 157,705 (+7,330) |
| zfinslim | 105,130 (+4,557) |
| mmrrc | 79,626 (+2,534) |
| go | 76,828 (+4,262) |
| impc | 56,298 (+1,805) |
| xenbase | 860 (+860) |
| hpoa | 326 (0) |
| Other | 0 (0) |
# Relations
| relation | count |
|---|---|
| Total | 38,330,141 (+2,243,673) |
| is_about | 10,319,918 (+965,307) |
| interacts with | 4,676,495 (+510,188) |
| in orthology relationship with | 3,761,734 (-127,374) |
| source | 3,220,500 (+22,760) |
| in 1 to 1 orthology relationship with | 3,144,637 (+162,508) |
| has phenotype | 2,882,369 (+59,669) |
| expressed in | 2,787,157 (+187,097) |
| involved in | 2,080,030 (+2,080,030) |
| Other | 1,617,861 (-31,003) |
| enables | 758,073 (-3,666) |
| is part of | 691,274 (-1,104) |
| mentions | 469,511 (+366,646) |
| is_allele_of | 446,889 (+33) |
| has_affected_feature | 428,599 (-2,805) |
| contributes to condition | 339,549 (+20,507) |
| is marker for | 164,696 (+10) |
| pathogenic_for_condition | 107,366 (+9) |
| colocalizes with | 106,724 (-237) |
| is_reference_allele_of | 60,528 (+1) |
| is_expression_variant_of | 51,665 (+1) |
| has role in modeling | 48,557 (+300) |
| likely_pathogenic_for_condition | 42,538 (+26) |
| has_genotype | 42,452 (+310) |
| derives_from | 30,365 (+91) |
| is substance that treats | 22,629 (+22,629) |
| targets_gene | 18,502 (-1) |
| causes condition | 5,144 (+25) |
| is causal germline mutation in | 2,216 (+33) |
| contributes to | 958 (-4) |
| is causal loss of function germline mutation of in | 460 (+6) |
| is causal susceptibility factor for | 432 (+5) |
| is causal somatic mutation in | 152 (+1) |
| is causal gain of function germline mutation of in | 61 (-4) |
| disease has basis in feature | 53 (0) |
| is causal germline mutation partially giving rise to | 45 (+15) |
| is_variant_allele_of | 2 (0) |
| involved_in | 0 (-1,988,336) |
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